SkyEurope flies directly between the following airports.
| Departing: | Arriving: |
| Amsterdam Schiphol (AMS), Amsterdam, Netherlands | Bratislava (BTS), Bratislava, Slovakia |
| Amsterdam Schiphol (AMS), Amsterdam, Netherlands | Budapest (BUD), Budapest, Hungary |
| Amsterdam Schiphol (AMS), Amsterdam, Netherlands | Vienna (VIE), Vienna, Austria |
| Amsterdam Schiphol (AMS), Amsterdam, Netherlands | Barca Airport (KSC), Kosice, Slovakia |
| Amsterdam Schiphol (AMS), Amsterdam, Netherlands | Warsaw (WAW), Warsaw, Poland |
| Amsterdam Schiphol (AMS), Amsterdam, Netherlands | J. Paul Ii Balice International Airport (KRK), Krakow, Poland |
| Eleftherios Venizelos (ATH), Athens, Greece | Vienna (VIE), Vienna, Austria |
| Eleftherios Venizelos (ATH), Athens, Greece | Budapest (BUD), Budapest, Hungary |
| Eleftherios Venizelos (ATH), Athens, Greece | Bratislava (BTS), Bratislava, Slovakia |
| Barcelona (BCN), Barcelona, Spain | Barca Airport (KSC), Kosice, Slovakia |
| Barcelona (BCN), Barcelona, Spain | Bratislava (BTS), Bratislava, Slovakia |
| Barcelona (BCN), Barcelona, Spain | J. Paul Ii Balice International Airport (KRK), Krakow, Poland |
| Barcelona (BCN), Barcelona, Spain | Vienna (VIE), Vienna, Austria |
| Barcelona (BCN), Barcelona, Spain | Budapest (BUD), Budapest, Hungary |
| Bergamo (BGY), Milan, Italy | Barca Airport (KSC), Kosice, Slovakia |
| Bergamo (BGY), Milan, Italy | J. Paul Ii Balice International Airport (KRK), Krakow, Poland |
| Bergamo (BGY), Milan, Italy | Vienna (VIE), Vienna, Austria |
| Bergamo (BGY), Milan, Italy | Bratislava (BTS), Bratislava, Slovakia |
| Bergamo (BGY), Milan, Italy | Budapest (BUD), Budapest, Hungary |
| Bratislava (BTS), Bratislava, Slovakia | Rome (FCO), Rome, Italy |
| Bratislava (BTS), Bratislava, Slovakia | Split (SPU), Split, Croatia |
| Bratislava (BTS), Bratislava, Slovakia | Echterdingen (STR), Stuttgart, Germany |
| Bratislava (BTS), Bratislava, Slovakia | Marco Polo (VCE), Venice, Italy |
| Bratislava (BTS), Bratislava, Slovakia | Warsaw (WAW), Warsaw, Poland |
| Bratislava (BTS), Bratislava, Slovakia | Zadar Airport (ZAD), Zadar, Croatia |
| Bratislava (BTS), Bratislava, Slovakia | Paris Orly (ORY), Paris, France |
| Bratislava (BTS), Bratislava, Slovakia | Cote d Azur (NCE), Nice, France |
| Bratislava (BTS), Bratislava, Slovakia | Amsterdam Schiphol (AMS), Amsterdam, Netherlands |
| Bratislava (BTS), Bratislava, Slovakia | Eleftherios Venizelos (ATH), Athens, Greece |
| Bratislava (BTS), Bratislava, Slovakia | Barcelona (BCN), Barcelona, Spain |
| Bratislava (BTS), Bratislava, Slovakia | Zurich (ZRH), Zurich, Switzerland |
| Bratislava (BTS), Bratislava, Slovakia | Copenhagen (CPH), Copenhagen, Denmark |
| Bratislava (BTS), Bratislava, Slovakia | Barca Airport (KSC), Kosice, Slovakia |
| Bratislava (BTS), Bratislava, Slovakia | Manchester (MAN), Manchester, United Kingdom |
| Bratislava (BTS), Bratislava, Slovakia | Bergamo (BGY), Milan, Italy |
| Bratislava (BTS), Bratislava, Slovakia | Dubrovnik (DBV), Dubrovnik, Croatia |
| Bratislava (BTS), Bratislava, Slovakia | London Stansted (STN), London, United Kingdom |
| Budapest (BUD), Budapest, Hungary | Rome (FCO), Rome, Italy |
| Budapest (BUD), Budapest, Hungary | Barcelona (BCN), Barcelona, Spain |
| Budapest (BUD), Budapest, Hungary | Cote d Azur (NCE), Nice, France |
| Budapest (BUD), Budapest, Hungary | Marco Polo (VCE), Venice, Italy |
| Budapest (BUD), Budapest, Hungary | Split (SPU), Split, Croatia |
| Budapest (BUD), Budapest, Hungary | Paris Orly (ORY), Paris, France |
| Budapest (BUD), Budapest, Hungary | Bergamo (BGY), Milan, Italy |
| Budapest (BUD), Budapest, Hungary | London Stansted (STN), London, United Kingdom |
| Budapest (BUD), Budapest, Hungary | Copenhagen (CPH), Copenhagen, Denmark |
| Budapest (BUD), Budapest, Hungary | Dubrovnik (DBV), Dubrovnik, Croatia |
| Budapest (BUD), Budapest, Hungary | Eleftherios Venizelos (ATH), Athens, Greece |
| Budapest (BUD), Budapest, Hungary | Amsterdam Schiphol (AMS), Amsterdam, Netherlands |
| Copenhagen (CPH), Copenhagen, Denmark | Bratislava (BTS), Bratislava, Slovakia |
| Copenhagen (CPH), Copenhagen, Denmark | Barca Airport (KSC), Kosice, Slovakia |
| Copenhagen (CPH), Copenhagen, Denmark | Budapest (BUD), Budapest, Hungary |
| Copenhagen (CPH), Copenhagen, Denmark | Vienna (VIE), Vienna, Austria |
| Dubrovnik (DBV), Dubrovnik, Croatia | Vienna (VIE), Vienna, Austria |
| Dubrovnik (DBV), Dubrovnik, Croatia | Budapest (BUD), Budapest, Hungary |
| Dubrovnik (DBV), Dubrovnik, Croatia | Barca Airport (KSC), Kosice, Slovakia |
| Dubrovnik (DBV), Dubrovnik, Croatia | Bratislava (BTS), Bratislava, Slovakia |
| Rome (FCO), Rome, Italy | Budapest (BUD), Budapest, Hungary |
| Rome (FCO), Rome, Italy | Vienna (VIE), Vienna, Austria |
| Rome (FCO), Rome, Italy | J. Paul Ii Balice International Airport (KRK), Krakow, Poland |
| Rome (FCO), Rome, Italy | Warsaw (WAW), Warsaw, Poland |
| Rome (FCO), Rome, Italy | Barca Airport (KSC), Kosice, Slovakia |
| Rome (FCO), Rome, Italy | Bratislava (BTS), Bratislava, Slovakia |
| J. Paul Ii Balice International Airport (KRK), Krakow, Poland | Bergamo (BGY), Milan, Italy |
| J. Paul Ii Balice International Airport (KRK), Krakow, Poland | London Stansted (STN), London, United Kingdom |
| J. Paul Ii Balice International Airport (KRK), Krakow, Poland | Amsterdam Schiphol (AMS), Amsterdam, Netherlands |
| J. Paul Ii Balice International Airport (KRK), Krakow, Poland | Barcelona (BCN), Barcelona, Spain |
| J. Paul Ii Balice International Airport (KRK), Krakow, Poland | Rome (FCO), Rome, Italy |
| J. Paul Ii Balice International Airport (KRK), Krakow, Poland | Paris Orly (ORY), Paris, France |
| J. Paul Ii Balice International Airport (KRK), Krakow, Poland | Manchester (MAN), Manchester, United Kingdom |
| Barca Airport (KSC), Kosice, Slovakia | Zadar Airport (ZAD), Zadar, Croatia |
| Barca Airport (KSC), Kosice, Slovakia | Bratislava (BTS), Bratislava, Slovakia |
| Barca Airport (KSC), Kosice, Slovakia | Copenhagen (CPH), Copenhagen, Denmark |
| Barca Airport (KSC), Kosice, Slovakia | Amsterdam Schiphol (AMS), Amsterdam, Netherlands |
| Barca Airport (KSC), Kosice, Slovakia | Split (SPU), Split, Croatia |
| Barca Airport (KSC), Kosice, Slovakia | Echterdingen (STR), Stuttgart, Germany |
| Barca Airport (KSC), Kosice, Slovakia | Marco Polo (VCE), Venice, Italy |
| Barca Airport (KSC), Kosice, Slovakia | Warsaw (WAW), Warsaw, Poland |
| Barca Airport (KSC), Kosice, Slovakia | Zurich (ZRH), Zurich, Switzerland |
| Barca Airport (KSC), Kosice, Slovakia | Vienna (VIE), Vienna, Austria |
| Barca Airport (KSC), Kosice, Slovakia | Prague - Ruzyne (PRG), Prague, Czech Republic |
| Barca Airport (KSC), Kosice, Slovakia | Paris Orly (ORY), Paris, France |
| Barca Airport (KSC), Kosice, Slovakia | Cote d Azur (NCE), Nice, France |
| Barca Airport (KSC), Kosice, Slovakia | Manchester (MAN), Manchester, United Kingdom |
| Barca Airport (KSC), Kosice, Slovakia | Bergamo (BGY), Milan, Italy |
| Barca Airport (KSC), Kosice, Slovakia | London Stansted (STN), London, United Kingdom |
| Barca Airport (KSC), Kosice, Slovakia | Dubrovnik (DBV), Dubrovnik, Croatia |
| Barca Airport (KSC), Kosice, Slovakia | Barcelona (BCN), Barcelona, Spain |
| Barca Airport (KSC), Kosice, Slovakia | Rome (FCO), Rome, Italy |
| Manchester (MAN), Manchester, United Kingdom | Vienna (VIE), Vienna, Austria |
| Manchester (MAN), Manchester, United Kingdom | J. Paul Ii Balice International Airport (KRK), Krakow, Poland |
| Manchester (MAN), Manchester, United Kingdom | Bratislava (BTS), Bratislava, Slovakia |
| Manchester (MAN), Manchester, United Kingdom | Barca Airport (KSC), Kosice, Slovakia |
| Cote d Azur (NCE), Nice, France | Vienna (VIE), Vienna, Austria |
| Cote d Azur (NCE), Nice, France | Barca Airport (KSC), Kosice, Slovakia |
| Cote d Azur (NCE), Nice, France | Bratislava (BTS), Bratislava, Slovakia |
| Cote d Azur (NCE), Nice, France | Budapest (BUD), Budapest, Hungary |
| Paris Orly (ORY), Paris, France | J. Paul Ii Balice International Airport (KRK), Krakow, Poland |
| Paris Orly (ORY), Paris, France | Barca Airport (KSC), Kosice, Slovakia |
| Paris Orly (ORY), Paris, France | Warsaw (WAW), Warsaw, Poland |
| Paris Orly (ORY), Paris, France | Vienna (VIE), Vienna, Austria |
| Paris Orly (ORY), Paris, France | Bratislava (BTS), Bratislava, Slovakia |
| Paris Orly (ORY), Paris, France | Budapest (BUD), Budapest, Hungary |
| Prague - Ruzyne (PRG), Prague, Czech Republic | Barca Airport (KSC), Kosice, Slovakia |
| Split (SPU), Split, Croatia | Vienna (VIE), Vienna, Austria |
| Split (SPU), Split, Croatia | Bratislava (BTS), Bratislava, Slovakia |
| Split (SPU), Split, Croatia | Budapest (BUD), Budapest, Hungary |
| Split (SPU), Split, Croatia | Barca Airport (KSC), Kosice, Slovakia |
| London Stansted (STN), London, United Kingdom | J. Paul Ii Balice International Airport (KRK), Krakow, Poland |
| London Stansted (STN), London, United Kingdom | Warsaw (WAW), Warsaw, Poland |
| London Stansted (STN), London, United Kingdom | Barca Airport (KSC), Kosice, Slovakia |
| London Stansted (STN), London, United Kingdom | Vienna (VIE), Vienna, Austria |
| London Stansted (STN), London, United Kingdom | Budapest (BUD), Budapest, Hungary |
| London Stansted (STN), London, United Kingdom | Bratislava (BTS), Bratislava, Slovakia |
| Echterdingen (STR), Stuttgart, Germany | Bratislava (BTS), Bratislava, Slovakia |
| Echterdingen (STR), Stuttgart, Germany | Vienna (VIE), Vienna, Austria |
| Echterdingen (STR), Stuttgart, Germany | Barca Airport (KSC), Kosice, Slovakia |
| Marco Polo (VCE), Venice, Italy | Bratislava (BTS), Bratislava, Slovakia |
| Marco Polo (VCE), Venice, Italy | Budapest (BUD), Budapest, Hungary |
| Marco Polo (VCE), Venice, Italy | Vienna (VIE), Vienna, Austria |
| Marco Polo (VCE), Venice, Italy | Barca Airport (KSC), Kosice, Slovakia |
| Vienna (VIE), Vienna, Austria | Paris Orly (ORY), Paris, France |
| Vienna (VIE), Vienna, Austria | Zurich (ZRH), Zurich, Switzerland |
| Vienna (VIE), Vienna, Austria | Zadar Airport (ZAD), Zadar, Croatia |
| Vienna (VIE), Vienna, Austria | Warsaw (WAW), Warsaw, Poland |
| Vienna (VIE), Vienna, Austria | Marco Polo (VCE), Venice, Italy |
| Vienna (VIE), Vienna, Austria | Echterdingen (STR), Stuttgart, Germany |
| Vienna (VIE), Vienna, Austria | Split (SPU), Split, Croatia |
| Vienna (VIE), Vienna, Austria | Barcelona (BCN), Barcelona, Spain |
| Vienna (VIE), Vienna, Austria | Barca Airport (KSC), Kosice, Slovakia |
| Vienna (VIE), Vienna, Austria | Bergamo (BGY), Milan, Italy |
| Vienna (VIE), Vienna, Austria | Vienna (VIE), Vienna, Austria |
| Vienna (VIE), Vienna, Austria | Amsterdam Schiphol (AMS), Amsterdam, Netherlands |
| Vienna (VIE), Vienna, Austria | Eleftherios Venizelos (ATH), Athens, Greece |
| Vienna (VIE), Vienna, Austria | Dubrovnik (DBV), Dubrovnik, Croatia |
| Vienna (VIE), Vienna, Austria | Copenhagen (CPH), Copenhagen, Denmark |
| Vienna (VIE), Vienna, Austria | London Stansted (STN), London, United Kingdom |
| Vienna (VIE), Vienna, Austria | Manchester (MAN), Manchester, United Kingdom |
| Vienna (VIE), Vienna, Austria | Cote d Azur (NCE), Nice, France |
| Vienna (VIE), Vienna, Austria | Rome (FCO), Rome, Italy |
| Warsaw (WAW), Warsaw, Poland | Vienna (VIE), Vienna, Austria |
| Warsaw (WAW), Warsaw, Poland | Paris Orly (ORY), Paris, France |
| Warsaw (WAW), Warsaw, Poland | London Stansted (STN), London, United Kingdom |
| Warsaw (WAW), Warsaw, Poland | Barca Airport (KSC), Kosice, Slovakia |
| Warsaw (WAW), Warsaw, Poland | Rome (FCO), Rome, Italy |
| Warsaw (WAW), Warsaw, Poland | Bratislava (BTS), Bratislava, Slovakia |
| Warsaw (WAW), Warsaw, Poland | Amsterdam Schiphol (AMS), Amsterdam, Netherlands |
| Zadar Airport (ZAD), Zadar, Croatia | Bratislava (BTS), Bratislava, Slovakia |
| Zadar Airport (ZAD), Zadar, Croatia | Vienna (VIE), Vienna, Austria |
| Zadar Airport (ZAD), Zadar, Croatia | Barca Airport (KSC), Kosice, Slovakia |
| Zurich (ZRH), Zurich, Switzerland | Barca Airport (KSC), Kosice, Slovakia |
| Zurich (ZRH), Zurich, Switzerland | Vienna (VIE), Vienna, Austria |
| Zurich (ZRH), Zurich, Switzerland | Bratislava (BTS), Bratislava, Slovakia |
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