| Airport Name | Three letter code | Town / City | Country | Airlines serving this route |
| Eleftherios Venizelos | ATH | Athens | Greece | Aegean Airlines
|
| Atauro Airport | AUT | Atauro | Indonesia | Aero Berlin
|
| Demokritos Airport | AXD | Alexandroupolis | Greece | Aegean Airlines
|
| Bremen | BRE | Bremen | Germany | Aero Berlin
|
| Basel Mulhouse | BSL | Basel / Mulhouse | Switzerland | Aero Berlin
|
| Corfu | CFU | Kerkyra | Greece | Aegean Airlines
|
| Cologne Airport | CGN | Cologne | Germany | Aero Berlin
|
| Chania | CHQ | Chania | Greece | Aegean Airlines
|
| Dresden Airport | DRS | Dresden | Germany | Aero Berlin
|
| Dusseldorf | DUS | Dusseldorf | Germany | Aegean Airlines
Aero Berlin
Condor
Condor
|
| Erfurt Airport | ERF | Erfurt | Germany | Aero Berlin
|
| Baden Airpark Airport | FKB | Karlsruhe Baden-Baden | Germany | Aero Berlin
|
| Munster Osnabruck Airport | FMO | Muenster | Germany | Aero Berlin
|
| Frankfurt | FRA | Frankfurt | Germany | Condor
Aero Berlin
Aegean Airlines
Condor
|
| Hannover Langenhagen | HAJ | Hanover | Germany | Aero Berlin
Condor
Condor
|
| Hamburg | HAM | Hamburg | Germany | Aero Berlin
|
| Heraklion | HER | Heraklion | Greece | Cyprus Airways
Cyprus Airways
Aegean Airlines
|
| Ioannina Airport | IOA | Ioannina | Greece | Aegean Airlines
|
| Chios | JKH | Chios | Greece | Aegean Airlines
|
| Mikonos | JMK | Mikonos | Greece | Aegean Airlines
|
| Thira | JTR | Thira | Greece | Aegean Airlines
|
| Megas Alexandros Apt. Airport | KVA | Kavala | Greece | Aegean Airlines
|
| Larnaca | LCA | Larnaca | Cyprus | Cyprus Airways
Aegean Airlines
Cyprus Airways
|
| Leipzig | LEJ | Leipzig | Germany | Condor
Condor
Aero Berlin
|
| Milan Linate | LIN | Milan | Italy | Aegean Airlines
|
| Linz | LNZ | Linz | Austria | Aero Berlin
|
| Mytilene | MJT | Mytilene | Greece | Aegean Airlines
|
| Munich | MUC | Munich | Germany | Condor
Aero Berlin
Condor
Aegean Airlines
|
| Nuremberg | NUE | Nuremberg | Germany | Aero Berlin
|
| Paderborn Airport | PAD | Paderborn | Germany | Aero Berlin
|
| Leonardo Da Vinci / Fiumicino | ROM | Rome | Italy | Aegean Airlines
|
| Ensheim Airport | SCN | Saarbruecken | Germany | Aero Berlin
|
| Thessaloniki | SKG | Thessaloniki | Greece | Aegean Airlines
|
| Echterdingen | STR | Stuttgart | Germany | Condor
Aegean Airlines
Aero Berlin
Condor
|
| Berlin Schonefeld | SXF | Berlin | Germany | Aero Berlin
|
| Salzburg | SZG | Salzburg | Austria | Aero Berlin
|
| Berlin Tegel | TXL | Berlin | Germany | Aero Berlin
|
| Vienna | VIE | Vienna | Austria | Aero Berlin
|
